PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41238.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 215aa    MW: 22852.4 Da    PI: 4.6658
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41238.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.99.1e-1754102255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+G+r  +++g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+++l+g
  GAY41238.1  54 SYRGIR--SRSGKWVSEIREPRK---TTRIWLGTYPTPEMAAAAYDVAALALKG 102
                 79***6..678*********843...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MADPHQRDQQ PPVTEPPKLS KPSIQVPELE PAPAPAASSS SPSLSSPSKG RHPSYRGIRS  60
RSGKWVSEIR EPRKTTRIWL GTYPTPEMAA AAYDVAALAL KGPETPLNFP NMIISYPIPA  120
STSASDIRAA AAQAAAARGS GSEPGPVQKE SKESEGTSSS TCMGQEFVDE YELLNMPNLL  180
VDMAEGMLVS PPRIDTPSSD DSAGNSAEES LWSYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.13e-38ERF family protein