PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY41590.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

C2H2

Protein Properties

Length: 255aa MW: 28608.7 Da PI: 10.0963

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY41590.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.2	6.9e-06	109	128	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C k+F+r nL+ H+ GAY41590.1 109 FSCHVCFKTFNRYNNLQMHM 128 89*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
METQNLSCHS SNVFAISSTN HIQIEPLNLF PSVTYNSNGG STEPQPSLNQ NRKARNEEKD 60 DVAVALHIGL PNYSHSSTNP SAKGNANVAA AKQYWIPTPE QILIGFTHFS CHVCFKTFNR 120 YNNLQMHMWG HGSQYRKGPE SLKGTQPRAI LGIPCYCCAE GCKNSINHPK AKPLKDFRTL 180 QTHYKRKHGL KPFMCRKCGK FLAVKGDWRT HEKNCGKRWL CVCGSDFKHK RSLKDHIKAL 240 ASANGPFSRP LLTAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34790.1	1e-114	C2H2 family protein