PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41832.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 237aa    MW: 26311.9 Da    PI: 5.4191
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41832.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.26.6e-21109159255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g++vAeIrdp++ng  +r++lg++ t+e+Aa a+++a+ +++g
  GAY41832.1 109 RYRGVRRRP-WGKFVAEIRDPKKNG--TRIWLGTYNTPEDAALAYDRAAFNMRG 159
                 69*******.***********9998..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MYKKNISPSE LALLESISQY LLDDDATSFQ IPISSPSETT INSNETLSFT ENSDVSNDME  60
TYRALHDAIN VGWISFDQID DETDGTSTST TKSTPDRTEV ARDTLVGARY RGVRRRPWGK  120
FVAEIRDPKK NGTRIWLGTY NTPEDAALAY DRAAFNMRGS KAKLNFPHLI GSNVEPVPLG  180
RVTKKRESPE PSSPSSSSSS SSSSSSFTVL SYDSPKPKRR NYGISFCTSD VNWENVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-41ERF family protein