PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41833.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 196aa    MW: 21962.2 Da    PI: 8.6623
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41833.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.51e-2068118355
         AP2   3 ykGVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr+++ +g+++AeIrdp++ ng  +r++lg+++t+e+Aa a+++a+ +++g
  GAY41833.1  68 YRGVRRRP-WGKFAAEIRDPNKkNG--ARVWLGTYDTPEGAALAYDRAAFNMRG 118
                 9*******.**********866566..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MYTENSVSDS DFAILESIRQ YLLNDDFDNV PSETSISVND DPLINSPTNS SFRTRGATTH  60
ESHVRVFYRG VRRRPWGKFA AEIRDPNKKN GARVWLGTYD TPEGAALAYD RAAFNMRGSK  120
AKLNFPHLIG SNVAPPLRVT KKRGSSSSSN YTLHLQSESP NSKRRKDIHS SSAANNEAGS  180
LCFASDDDDF CIWFYQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.16e-41ERF family protein