PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41834.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 144aa    MW: 15934 Da    PI: 10.4694
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41834.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.6e-1956105355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr ++ +g+++AeIrd ++ng   r +lg+++t+e+Aa a+++a+ k++g
  GAY41834.1  56 YRGVRKRP-WGKFAAEIRDRKKNG--SRLWLGTYDTPEGAALAYDRAAFKMRG 105
                 9*******.**********77787..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MEDCEALHDT VKEGWISFDQ LDGKSTPHAP PQAQASGFRL QKAATMTREI HVRVNYRGVR  60
KRPWGKFAAE IRDRKKNGSR LWLGTYDTPE GAALAYDRAA FKMRGSKAKL NFPSLIASNV  120
EPQPHGITKK NMASSSSSSS ITAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-37ERF family protein