PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41838.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 220aa    MW: 23941.5 Da    PI: 6.8023
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41838.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.8e-1999150256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                 gy+GVr+++ +g+++Ae rdp++ng  +r +lg++ t+e+Aa a+++a+ kl+g+
  GAY41838.1  99 GYRGVRRRP-WGKYAAEMRDPKKNG--ARAWLGTYETPEDAAMAYDRAAFKLRGA 150
                 8********.***********9998..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MYGVSSFGFE DPDIGLLESI QEYLLTDDIF EEAPAAIKSE NGEPLTSSPH HSSFMSSLWS  60
DLLPVEDDLA SGSASIVGSN PFDGNVIDSN KHDPRRGVGY RGVRRRPWGK YAAEMRDPKK  120
NGARAWLGTY ETPEDAAMAY DRAAFKLRGA KAKLNFPHLI GSAHCREPIR VNPRRRPQSL  180
DSSSSSSSSS SGTSTTAFSN SKISASASAA VDHQFVINWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.17e-37ERF family protein