PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41899.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GATA
Protein Properties Length: 368aa    MW: 41793.7 Da    PI: 7.6242
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41899.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.57.7e-18272306135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++C + kTp+WR gp g+ktLCnaCG++y++ +l
  GAY41899.1 272 CTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRL 306
                 *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    
MPYLKILYIL HCSIRDVYPI VSVLERERER ENRLKKQCDS VSGVFSHYCC NCMVTPCTFL  60
CPPARPFNIN QLINSPSLSS LITLYQQLRE LSPNHRRLFF ELHNRMDIYG LPSNNTTTQD  120
LFRIDDLLDF SNDELFTSSS SAATANTTAI ASDTDHLLQA QHQSFDSFNP SSDFTGDLCV  180
PSDDVAELEW LSQFVDDSCM DFPANSLAGT IVRSDTSLSG RGRSKRSKAT NSAANTTTWN  240
WTSSESESGN SKQKRENHRQ SSPIPEGGVR RCTHCASEKT PQWRTGPLGP KTLCNACGVR  300
YKSGRLVPEY RPASSPTFVL TQHSNSHRKV LELRRQKELL RQQQLQQQQQ QEEGQGQIYR  360
HQRDFEVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.14e-58GATA family protein