PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41923.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GRAS
Protein Properties Length: 706aa    MW: 78204.6 Da    PI: 5.855
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS322.77.5e-993487052374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 +++++++Ae ++ g+  laq +Larl+++ sp  +p+qR+a+y++eAL+  l+          p+ + s +n + +++a+k fse+sPil+f+++t+Nq
  GAY41923.1 348 IDQIFKAAELIEMGNPVLAQGILARLNHQLSPVVKPFQRAAFYVKEALQLLLHM-----NMNTPSAAMSGYNIIFKISAYKSFSEISPILQFANFTCNQ 441
                 67899**********************************************998.....4445777778889*************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp. 198
                 a+lea+eg++r+HiiDfdi++G+QW++L+q+L  R+egppsl+iT++ s++++++ el  t+e+L++fA+e+++p+e ++l  ++l     + L ++  
  GAY41923.1 442 ALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPLELEILSLETL-ISASWPLPLQGl 539
                 ********************************************************************************844433.334566655555 PP

        GRAS 199 .gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                  ++++aVnl + +++ +  +++     + vL++vk+l+Pk+vv  ++ +d+ + +F++++++al+ ys l++sl++    + ++ +k+Er+l+ + i++
  GAY41923.1 540 eNDVTAVNLPIGVFSNY--PATF----PLVLRFVKQLQPKIVVSLDRSCDRPDFPFAHHMVHALQSYSGLLESLDSV-NVNLDALQKIERFLVYPCIEK 631
                 5**********998887..4444....55*********************************************654.3466999************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +v  ++++     e+l  Wr+ ++++GF p+++s++a++qa++l+++++++g++ve+++ slvl+W++++L+s++aWr
  GAY41923.1 632 IVLGRHRS----PERLPPWRSLFMQSGFAPLTFSNFAESQADCLVQRTPVRGFHVEKRQSSLVLCWQRKELISATAWR 705
                 ***99998....9****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 706 aa     Download sequence    
MRAMPLAFED FQGKGALDFS SSSSDSRQFH HQQHKEEQDW LLSNSNRGNK KANCCYVGSA  60
TTEPTSVLDN RRSPSPPTSS STLSSSLGGG GSSTTDTTGV AATNASSNPP SVDITNTEKC  120
GGLGMEDWES VLSGSPNQEQ SILRLIMGDT DDPSLGLNKI LHQDTEFNAG FGVVDQASLG  180
FETPFTSVSS NIDPDFVVNS ARLGSVSTQN HIFSMAAATN LSPPPSVFQP QPVEALDEKP  240
QIFRPQLIMN QNQAQYAQNP ALFLPLSYAQ MQEHQLLSPP PPKRLNLGPN QKVPLSDSGQ  300
QELYLRRQQQ QQLQMLQQRQ TMGVTATATK QKMVNDELAN QQLQQAVIDQ IFKAAELIEM  360
GNPVLAQGIL ARLNHQLSPV VKPFQRAAFY VKEALQLLLH MNMNTPSAAM SGYNIIFKIS  420
AYKSFSEISP ILQFANFTCN QALLEAFEGC NRIHIIDFDI GYGGQWASLM QELVFRSEGP  480
PSLKITAFTS SSTHDEFELG FTQENLKHFA SEINIPLELE ILSLETLISA SWPLPLQGLE  540
NDVTAVNLPI GVFSNYPATF PLVLRFVKQL QPKIVVSLDR SCDRPDFPFA HHMVHALQSY  600
SGLLESLDSV NVNLDALQKI ERFLVYPCIE KIVLGRHRSP ERLPPWRSLF MQSGFAPLTF  660
SNFAESQADC LVQRTPVRGF HVEKRQSSLV LCWQRKELIS ATAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-138GRAS family protein