PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY42407.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GATA
Protein Properties Length: 250aa    MW: 27892 Da    PI: 10.4035
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY42407.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.32.5e-19167201135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg+ kTp+WR gp g+ktLCnaCG+++++ +l
  GAY42407.1 167 CQHCGAEKTPQWRAGPMGPKTLCNACGVRFKSGRL 201
                 *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MPFDRLRRQD TMMVQKTVLP FLKINSGRAF VEFNVQVSLF FLAVSHEECA EEELEWLSNF  60
PTVETFVDIS SNPNILKQQS PNSVLENSNS SSSTSTNGST ITNGNNNSNS IIMNCCGNLR  120
VPVRARSKLR TRCRRELLNQ EAWWGSVHGS VKAAKPVVSK VIIGRKCQHC GAEKTPQWRA  180
GPMGPKTLCN ACGVRFKSGR LVPEYRPANS PTFSSELHSN SHRKVVEMRR QKQMMGIELG  240
VLGVKPVDKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.11e-46GATA family protein