PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY42431.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 244aa MW: 28130.6 Da PI: 8.2008

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY42431.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	91.7	1.2e-28	9	147	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.... 95 lppG+rF Ptdee+v +yL +kv+g++++++ vi+++d+y+ e ++ +++e+ +yfF++ +kk+++g + +r t+ g+W+++ +++ ++ GAY42431.1 9 LPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRynkt 107 79**************************999*******99985445688899**********************998877666668888 PP NAM 96 .....kgelvglkktLvfy..kgrapkgektdWvmheyrl 128 k++++g ++ +++ +g++ k +Wvmheyrl GAY42431.1 108 gdkiiKKQHIGSRRNFTYVpkEGSRGGVIKGTWVMHEYRL 147 888887788******5445555556*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MERHQLPALP PGYRFAPTDE EIVAHYLYNK VHGRPVSTSA VIDNIDVYRD ENVWIRIFER 60 TGENALYFFT TLKKKTENGV QVERETNCGT WRSQKNTRIY RHRYNKTGDK IIKKQHIGSR 120 RNFTYVPKEG SRGGVIKGTW VMHEYRLDGI SISNARINNI GDYVICRIKK KQPKREELMS 180 GDNDGPVRNS MSGLVQPPPS NNTSEWFNVQ DLEKILFDSS TANDEGVDLE DFSLGISLED 240 LDNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	6e-25	NAC family protein