PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY42448.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 530aa MW: 60404.8 Da PI: 6.4472

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY42448.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	68.3	2.2e-21	9	140	2	128
NAM 2 ppGfr..FhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgy.Wkatgkdkevls 94 p Gf+ F Ptde+++ +yL +kv g++l+ +e+ ++++d+y+ + w+ ++++ +e+ +yfF++ +kk+++g++ r+tk g Wk++ +++ + GAY42448.1 9 PSGFKiaFVPTDEQIIRDYLFNKVYGNPLPSDEAiVDHCDLYDEsDDWKK--HFEErGENILYFFTPLKKKSENGSKIDRTTKCGAtWKSQTEKRILDG 105 7777666*******************9998884677799964255554..4444145566**************99966449999887777 PP NAM 95 kkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 ++++++g kk L+f k++++ +Wvm ++rl GAY42448.1 106 QSQQHIGSKKNLTFLpKNDDQVKGGMSWVMYQFRL 140 78999********544444445789****98 PP
2	NAM	61.4	2.9e-19	194	340	4	128
NAM 4 Gfr..FhPtdeelvveyLkkkvegkkleleevikevdiyk.vePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.... 95 G++ F+P+de+++ +yL k+ g+ l+ +e+i e+ +y+ ++ w+ + +++e+ +yfF+ ++k++++ r r+tk g+Wk++ + ++ + GAY42448.1 194 GYKilFDPSDEQIIRDYLFGKLCGNGLPSNEAIIECTLYDgCHIWRKQF-QEKGENMLYFFIALRRKSEKDPRIDRVTKCGTWKSQKD-NGIHWSssss 290 55444********************9999999998885378888763.34566788**********************8855.5555543555 PP NAM 96 .........kgel..vglkktLvfy........kgrapkgektdWvmheyrl 128 + + +g +k + f + ++ ++ +t+Wvmheyrl GAY42448.1 291 ssssstshnN--EvlIGSRKNFSFIpkkcccddHREHAEAGSTTWVMHEYRL 340 5555554444..066******99888876456666679******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MSCQNCVLPS GFKIAFVPTD EQIIRDYLFN KVYGNPLPSD EAIVDHCDLY DESDDWKKHF 60 EERGENILYF FTPLKKKSEN GSKIDRTTKC GATWKSQTEK RILDGQSQQH IGSKKNLTFL 120 PKNDDQVKGG MSWVMYQFRL DGILLNNAND IVVCRVSKNV KNKKESKDNN NINNARPIMA 180 PKVMASSNHM LPSGYKILFD PSDEQIIRDY LFGKLCGNGL PSNEAIIECT LYDGCHIWRK 240 QFQEKGENML YFFIALRRKS EKDPRIDRVT KCGTWKSQKD NGIHWSSSSS SSSSSTSHNN 300 EVLIGSRKNF SFIPKKCCCD DHREHAEAGS TTWVMHEYRL GGNVLKQYCK MKFKAECDYV 360 ICRIKKKVKN EEENKNDSNA GPMVPTDNHV SRNMSEVELS DSYWSFAENL PNLFSLSEDA 420 INADYDYFNP NLCICLEDLE DDDDKRVVNG MQEQYASASI AIAPVVSAAR NEQDQPGHHK 480 RFKAADDEEV SLARAKEING LDYKTEETGY LEDLVRSCAY YCGDRRAAGS

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MSCQNCVLPS GFKIAFVPTD EQIIRDYLFN KVYGNPLPSD EAIVDHCDLY DESDDWKKHF  60
EERGENILYF FTPLKKKSEN GSKIDRTTKC GATWKSQTEK RILDGQSQQH IGSKKNLTFL  120
PKNDDQVKGG MSWVMYQFRL DGILLNNAND IVVCRVSKNV KNKKESKDNN NINNARPIMA  180
PKVMASSNHM LPSGYKILFD PSDEQIIRDY LFGKLCGNGL PSNEAIIECT LYDGCHIWRK  240
QFQEKGENML YFFIALRRKS EKDPRIDRVT KCGTWKSQKD NGIHWSSSSS SSSSSTSHNN  300
EVLIGSRKNF SFIPKKCCCD DHREHAEAGS TTWVMHEYRL GGNVLKQYCK MKFKAECDYV  360
ICRIKKKVKN EEENKNDSNA GPMVPTDNHV SRNMSEVELS DSYWSFAENL PNLFSLSEDA  420
INADYDYFNP NLCICLEDLE DDDDKRVVNG MQEQYASASI AIAPVVSAAR NEQDQPGHHK  480
RFKAADDEEV SLARAKEING LDYKTEETGY LEDLVRSCAY YCGDRRAAGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	1e-13	NAC family protein