PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY42686.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 86aa    MW: 9644.6 Da    PI: 8.9031
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY42686.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.23.3e-071559345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +WT    +++  a + + ++   +W+ +a+ +  g+t +++k ++ 
       GAY42686.1 15 SWTVKQNKQFETALAFYDKDtpdRWDNVAKAVS-GKTVEDVKKHYE 59
                     7********************************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 86 aa     Download sequence    
MASNTMTSSR SSGSSWTVKQ NKQFETALAF YDKDTPDRWD NVAKAVSGKT VEDVKKHYEL  60
LVKDINDIEA GRYPHPNYRS TTGTGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.14e-31MYB_related family protein