PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY42692.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ZF-HD
Protein Properties Length: 331aa    MW: 36641.7 Da    PI: 8.2693
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY42692.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer105.72.8e-33129185360
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                  ++rY+eClkNhAa++G+h++DGCgEfmps ge+gt+++lkCaAC+CHRnFHR+e + e
   GAY42692.1 129 SIRYRECLKNHAANMGSHVIDGCGEFMPS-GEDGTPEGLKCAACDCHRNFHRKEIDGE 185
                  689*************************9.999********************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MTSSMRYNRD SSSTVSTPIN SIAGEMIRDQ GTVHGEAIFN LPQTLDQHQH PPYRHHQLNS  60
QQQQQPQTQQ NLQNKPSAGS SNPEAQHPDP APVSVANTTT TSTKEANRSN QRSPAQAPTT  120
STAIITAPSI RYRECLKNHA ANMGSHVIDG CGEFMPSGED GTPEGLKCAA CDCHRNFHRK  180
EIDGESQSQS QYAAHSLYTY NYPSRNNSTQ RNHHHQQQQQ PPPPFHHLQQ HHRISYTSPQ  240
TASIAPMMMT FGGGGGAGGS SGGLDESSSE DLNMFHSSAG GQTSMQAKKK RFRTKFSQEQ  300
KDKMMXXXXX XXXXXXXXXX XXXXXXXXXX X
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.12e-31ZF-HD family protein