PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY42700.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GATA
Protein Properties Length: 255aa    MW: 28362.2 Da    PI: 8.0588
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY42700.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.52.4e-20139173135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  GAY42700.1 139 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 173
                 ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MMHRCSSSHG NMVGSSCSCS SGLYPSQSNS FSMLFSMPNH KSYDETDMYA FMSPSSVDCT  60
LSLGTPSTRL SEDDEKRIRH DQRRSASNCM TDFCWDFLHT KNSPYNTAQQ NHKTSRGGNN  120
SSNTISSSSG NDPLLARRCA NCDTTSTPLW RNGPRGPKSL CNACGIRFKK EERRATAANA  180
NSSNIASAAE QPHGYYNNSW VQVQQTQSQK MPCFSPANEF RFIEDSDQTS DTGVPFLSWR  240
LNVADRPGLV HDFTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.17e-65GATA family protein