PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY42787.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 453aa MW: 50101.9 Da PI: 8.8719

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY42787.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.4	1.4e-09	349	386	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + GAY42787.1 349 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 386 664459******************************88 PP
2	BELL	93	2.8e-30	227	280	19	72
BELL 19 VdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 Vd+rY++y+eq+q+v+ sF+ v+g g+a pYt+lA+ka+SrhFrcLkdaia q+ GAY42787.1 227 VDRRYNHYCEQMQMVVTSFDLVMGFGAAVPYTALAQKAMSRHFRCLKDAIAAQL 280 9**************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MGIATPPTPA VVRIGDSHNN NPIPSIQSDK SNCTNSMSQD YHHQAGIFSF SNGFERSAVT 60 HHQERHQHTA QQIRRDKLRV QGGYEQPPPP LVGIEEEDQS TELPVYDTAG MLSEMFNFPP 120 GGGGGAASTD QLLDQPIQLQ SSYRTPRPTP AADWYGGNRQ GQNHQVRVGY GSSLGVVNVL 180 RNSKYAKAAQ ELLEEFCSVG RGQFKKSKFG KNNTNPSSSS GGGGGGVDRR YNHYCEQMQM 240 VVTSFDLVMG FGAAVPYTAL AQKAMSRHFR CLKDAIAAQL KQSCELLGEK DVAGTSGITK 300 GETPRLKLLE QSLRQQRAFH QMGMMEQEAW RPQRGLPERS VNILRSWLFE HFLHPYPSDA 360 DKHLLARQTG LSRNQVSNWF INARVRLWKP MVEEMYQQEA KEAEESQERE INQSNGNNNN 420 GIAQTPTPST TTTAAAAASS TTITPTGKKI RNQ

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MGIATPPTPA VVRIGDSHNN NPIPSIQSDK SNCTNSMSQD YHHQAGIFSF SNGFERSAVT  60
HHQERHQHTA QQIRRDKLRV QGGYEQPPPP LVGIEEEDQS TELPVYDTAG MLSEMFNFPP  120
GGGGGAASTD QLLDQPIQLQ SSYRTPRPTP AADWYGGNRQ GQNHQVRVGY GSSLGVVNVL  180
RNSKYAKAAQ ELLEEFCSVG RGQFKKSKFG KNNTNPSSSS GGGGGGVDRR YNHYCEQMQM  240
VVTSFDLVMG FGAAVPYTAL AQKAMSRHFR CLKDAIAAQL KQSCELLGEK DVAGTSGITK  300
GETPRLKLLE QSLRQQRAFH QMGMMEQEAW RPQRGLPERS VNILRSWLFE HFLHPYPSDA  360
DKHLLARQTG LSRNQVSNWF INARVRLWKP MVEEMYQQEA KEAEESQERE INQSNGNNNN  420
GIAQTPTPST TTTAAAAASS TTITPTGKKI RNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23760.2	1e-128	TALE family protein