PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY42930.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family E2F/DP
Protein Properties Length: 415aa    MW: 46793 Da    PI: 5.2538
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY42930.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP84.96.1e-27137202171
     E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                 r+++sL+llt+kf++l++++++g+++ln  a+ L   +v  ++RRiYDi+NVLe+++liek++kn+irwkg
  GAY42930.1 137 RYDSSLGLLTRKFINLIQEAKDGTLDLNRTAEVL---EV--QKRRIYDITNVLEGIRLIEKTSKNHIRWKG 202
                 6899******************************...99..****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    
MQEKNRDNKT SKEKVTTSLG ANRNYHSLLG KIPLSSNQNN TLNVNSNSTD IDICNKIEDT  60
HSAFSRLELK QTNELANHAA QNIARRDKVV NAPSLEPESC ASGKSNRKLK GLKSTKSGTQ  120
GSNADAPNGL NLSNGCRYDS SLGLLTRKFI NLIQEAKDGT LDLNRTAEVL EVQKRRIYDI  180
TNVLEGIRLI EKTSKNHIRW KGSDSLGTSK LDDQVARLKA EIESLHAEEC RIDDSIREKQ  240
ELIRTLEENE NHQKYMFLTE EDIASLPCFQ NQTLIAIKAP QASYIEVPDP DEDISFLKRQ  300
YKMIIRSTTG PIDVYLLSYE NDVHSKYQSE GKDITLQQAN SANPSTWNYE PCGVPNFRLS  360
LEHEDNQKRS SDTFSLMSSE AASGIQKIVP SDCDIDDDYW FRSDPEVSIT DLWNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G47870.21e-107E2F/DP family protein