PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY42964.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family BBR-BPC
Protein Properties Length: 357aa    MW: 39749.1 Da    PI: 9.7253
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY42964.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind3896.9e-119233571301
   GAGA_bind   1 mdddgsre..rnkg.yyepa..aslkenl..glqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla 92 
                 mdd g+re  r+k+ +y+ a  + l +++   +q+m+++aerda+++ernla+sekkaa+aerdmaflqrd+a+aern+a++erdn++++l+++ensl 
  GAY42964.1  23 MDDGGHREngRHKAdQYKAAqgQWLMHHQpsMKQIMTIMAERDAALQERNLAISEKKAAIAERDMAFLQRDTAIAERNNAILERDNAIASLQYRENSLG 121
                 9*****999*****99*9544433433331145***************************************************************987 PP

   GAGA_bind  93 ...salpvgvqvlsgtksidslqqlse..pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesader 186
                    s++p+g+q+++g+k++++ qq+ +  +++++ a+  re+++ +alp++  a+ea + ++ k   r   +ke+k  +++kk++ks +kvk+e++d +
  GAY42964.1 122 gnmSSCPPGCQISRGVKHMHHPQQHVHqlHHVSEAAYS-REMHTGDALPVSPGASEAAKPRRYK---R---AKEPKVLSPNKKTAKSPRKVKRENEDLN 213
                 8889********************55545555565555.**********988666665555554...4...4444444555555566677777776644 PP

   GAGA_bind 187 .............................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRia 256
                                              sk+++k + l+ln+v++Dest+P+P+CsCtG+lrqCYkWGnGGWqSaCCtt++S+yPLP+++++r+aR++
  GAY42964.1 214 kvvfgkpsewksvqdldggdddvnkqstaSKSDWKGQVLGLNQVTFDESTMPPPACSCTGVLRQCYKWGNGGWQSACCTTSLSMYPLPAVPNKRHARVG 312
                 47788889999**************************************************************************************** PP

   GAGA_bind 257 grKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                 grKmS++af+klL +LaaeG+dls+pvDLkdhWAkHGtn+++ti+
  GAY42964.1 313 GRKMSGSAFNKLLTRLAAEGHDLSHPVDLKDHWAKHGTNRYITIK 357
                 ********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MSIFFCWVAY LLLANSAFCA SQMDDGGHRE NGRHKADQYK AAQGQWLMHH QPSMKQIMTI  60
MAERDAALQE RNLAISEKKA AIAERDMAFL QRDTAIAERN NAILERDNAI ASLQYRENSL  120
GGNMSSCPPG CQISRGVKHM HHPQQHVHQL HHVSEAAYSR EMHTGDALPV SPGASEAAKP  180
RRYKRAKEPK VLSPNKKTAK SPRKVKRENE DLNKVVFGKP SEWKSVQDLD GGDDDVNKQS  240
TASKSDWKGQ VLGLNQVTFD ESTMPPPACS CTGVLRQCYK WGNGGWQSAC CTTSLSMYPL  300
PAVPNKRHAR VGGRKMSGSA FNKLLTRLAA EGHDLSHPVD LKDHWAKHGT NRYITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-160BBR-BPC family protein