PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY42997.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 248aa    MW: 27167.4 Da    PI: 7.4335
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY42997.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.39e-194089255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                 ykGVr++  +g+WvAeIr+p   + r +r +lg+f+t  eAa a++aa++kl+g
  GAY42997.1 40 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTSHEAAVAYDAAARKLYG 89
                69****999.**********8...3.35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MSKALMGGIG EKKQLKKPAQ ASSRKGCMRG KGGPENALCT YKGVRQRTWG KWVAEIREPN  60
RGARLWLGTF DTSHEAAVAY DAAARKLYGP DAKLNLPELP SAQSHHLPAS SVNCTQHVAQ  120
RRNQPQMIHN SGITCSSNSP LPRSSNNDAT QVYNFNYNNS AMSFPDNGSV GSHGKLAENE  180
VKFSLNEQET DGFWENLNVN SPVFDESIWA EAAMSVDYPV MGEQGLLNAN FVDASCCGWD  240
MLPTPWCV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.13e-50ERF family protein