PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY43022.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 453aa MW: 50696.7 Da PI: 6.3271

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY43022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	32	2.1e-10	375	412	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e++ LA+++gLt++qV++WF N R + GAY43022.1 375 FEHflHPYPNDSEKQLLASQTGLTKNQVSNWFINARVR 412 554458******************************88 PP
2	BELL	103.8	1.2e-33	237	308	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+qel+ ++akL+slleeV+ +Y+ y++q++ v+ss+e++aglg+ak+YtslAl+a+SrhF +L+dai++qi GAY43022.1 237 EKQELHLRIAKLISLLEEVESKYEIYYNQMEEVVSSYEVIAGLGAAKSYTSLALQAMSRHFCSLRDAIISQI 308 689********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MVSKDSPPNP ASNMLHQFII SDSITAQNLA NQHFDTYGSA LRGNNILPHS FGVLPSIQSL 60 GERISRSMDL VHVHAPAVAE ESSEISHTRH LMDLLGASNE TNDQSQRLSL SLGSHMLVPS 120 GHYNQSPNYL FYGDEAREVC NPGVDQHVSE GYSFNSNSIN RACSIDGTES FAYAVGNSRF 180 LRPAQSLLEE VVNVGKNIDM SDERYISKLY HGSRRGGLRL SSELKAEMCN TGTLSAEKQE 240 LHLRIAKLIS LLEEVESKYE IYYNQMEEVV SSYEVIAGLG AAKSYTSLAL QAMSRHFCSL 300 RDAIISQINI ASRRFYQDLP KISSGLSQLS LFDREARHHR MSLQQLGMFH SQRQVWRPIR 360 GLPETSVGIL RSWLFEHFLH PYPNDSEKQL LASQTGLTKN QVSNWFINAR VRLWKPMIEE 420 MYREEFADSS EDSNPSFAGS SATREGGADQ AGD

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MVSKDSPPNP ASNMLHQFII SDSITAQNLA NQHFDTYGSA LRGNNILPHS FGVLPSIQSL  60
GERISRSMDL VHVHAPAVAE ESSEISHTRH LMDLLGASNE TNDQSQRLSL SLGSHMLVPS  120
GHYNQSPNYL FYGDEAREVC NPGVDQHVSE GYSFNSNSIN RACSIDGTES FAYAVGNSRF  180
LRPAQSLLEE VVNVGKNIDM SDERYISKLY HGSRRGGLRL SSELKAEMCN TGTLSAEKQE  240
LHLRIAKLIS LLEEVESKYE IYYNQMEEVV SSYEVIAGLG AAKSYTSLAL QAMSRHFCSL  300
RDAIISQINI ASRRFYQDLP KISSGLSQLS LFDREARHHR MSLQQLGMFH SQRQVWRPIR  360
GLPETSVGIL RSWLFEHFLH PYPNDSEKQL LASQTGLTKN QVSNWFINAR VRLWKPMIEE  420
MYREEFADSS EDSNPSFAGS SATREGGADQ AGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75430.1	1e-107	TALE family protein