PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY43034.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 352aa    MW: 38450.1 Da    PI: 7.3609
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY43034.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.92.4e-052933321155
                 HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  GAY43034.1 293 VRKEKLGDRIAALQQLVAPF-----GKTDTASVLLEAIGYIKFLQ 332
                 67789999*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MLCNNGKVAS GSTQNAWTPI PNVTLSSGNF IYNGVILNST HKNEILLPPA ANSSMIQESA  60
ALHWINSQSA HEHFAKIKDE FSDSFPKFTE MSSSPSSNIN EDSDLSTASY LKNEQKNLND  120
LGDKLLLKSA ISSGFPINGN HFPAGDLYSS AHNISSVGGA MPSRGNFSQI YPSINISNLS  180
QTSSTNSTNF DMNLQFLDLL ASSRFSGDFS QPSHDNLGLY KESLPFGCDQ HHLQQSSRRP  240
SCSPSNKIAH FINNSEITEA TKRHGGVMEP KATQFASKKS RLESRASCPP MKVRKEKLGD  300
RIAALQQLVA PFGKTDTASV LLEAIGYIKF LQNQVEVISI PNVLVEIFYV PF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.19e-51bHLH family protein