PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY43068.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 92aa    MW: 10577.8 Da    PI: 9.1212
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY43068.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.41.8e-091660344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                      WT+e  +++ +a + + ++   +W  +ar +g g+++ ++k ++
       GAY43068.1 16 TWTPEQNKKFERALAVYDKDtpdRWQNVARAVGGGKSPDDVKRHY 60
                     7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MASSSIASSR RVDQSTWTPE QNKKFERALA VYDKDTPDRW QNVARAVGGG KSPDDVKRHY  60
DRLVEDLIFI ESAQFPLPNY KNTGKQLHWH SC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.23e-33MYB_related family protein