PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY43076.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 109aa    MW: 12294.8 Da    PI: 4.9411
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY43076.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.95.4e-09752346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                      WT+   +l+ +a + + ++   +W+  ar +g g+t +++k ++ +
       GAY43076.1  7 TWTAKQNKLFENALAIYDKDtpdRWRNLARAVG-GKTVEEVKRHYEM 52
                     7********************************.***********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    
MASGGSTWTA KQNKLFENAL AIYDKDTPDR WRNLARAVGG KTVEEVKRHY EMLAEDVSRI  60
EAGEIPLPDY KKIGGTNKAH SYINMDNEEQ SLFGVLPNKD DIPDTLIER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.12e-34MYB_related family protein