PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY43152.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 187aa    MW: 21105.3 Da    PI: 8.3011
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY43152.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.58.9e-121041644198
                 TTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE- CS
          B3  41 esgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvfr 98 
                  +g++We+ +     +k+     +++ Wk F+ +n+Lk+gD +vF+l+  r ++ +++v+++r
  GAY43152.1 104 YKGKEWEMVYLGedfQKRN--KRFGSEWKTFAIDNKLKVGDACVFELMeCRnDCLKFRVQILR 164
                 589*******667444444..45899********************88767799999999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
PLLVLSRGLT GSRLRTEKAM IGAVGSCSGK GVEDAQLKDP QFQTASKPTV IEVQGDEFWP  60
LSGKPYFNAI ISKSQLKPMN LMQYSIQRTL EILPSKTIPA FLVYKGKEWE MVYLGEDFQK  120
RNKRFGSEWK TFAIDNKLKV GDACVFELME CRNDCLKFRV QILRGDIPSK FEDNTNGENE  180
DTTIIVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.15e-06B3 family protein