PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY43232.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

GRF

Protein Properties

Length: 345aa MW: 37886 Da PI: 9.1069

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY43232.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.4	6.8e-25	86	130	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ GAY43232.1 86 DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVES 130 79****************************************986 PP
2	QLQ	63.8	4.3e-22	24	60	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+FT +Q+q+L++Q+l++Ky++a++PvPp+L+++iqk GAY43232.1 24 SPFTVSQWQELEHQALIFKYMVAGLPVPPDLVLPIQK 60 89*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MNSGNGGGGA GGAGGLGMMG MRASPFTVSQ WQELEHQALI FKYMVAGLPV PPDLVLPIQK 60 SFESISHRFF HHPTMGYCSF YGKKVDPEPG RCRRTDGKKW RCSKDAYPDS KYCERHMHRG 120 RNRSRKPVES QTITQSSSTV TSLTATGSSG GTGSYQNLPL HAFANPQGTT SGTNQSHYHV 180 DSISCGIPNK EYRYLQVQGL KPEVGEHSFF TEASGSNRGL QMDSPIDSAW PLMQSRVSSH 240 PQSKSSNTSI LQNDYPQHSL FSSEFTSGEP VKQEGQSLRP FFDEWPKTRD SWSGLEDKRS 300 HQTSFSTTKL SISIPMASSD FSATSSRSPH GSGHEIKRNL AGAHD

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MNSGNGGGGA GGAGGLGMMG MRASPFTVSQ WQELEHQALI FKYMVAGLPV PPDLVLPIQK  60
SFESISHRFF HHPTMGYCSF YGKKVDPEPG RCRRTDGKKW RCSKDAYPDS KYCERHMHRG  120
RNRSRKPVES QTITQSSSTV TSLTATGSSG GTGSYQNLPL HAFANPQGTT SGTNQSHYHV  180
DSISCGIPNK EYRYLQVQGL KPEVGEHSFF TEASGSNRGL QMDSPIDSAW PLMQSRVSSH  240
PQSKSSNTSI LQNDYPQHSL FSSEFTSGEP VKQEGQSLRP FFDEWPKTRD SWSGLEDKRS  300
HQTSFSTTKL SISIPMASSD FSATSSRSPH GSGHEIKRNL AGAHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	6e-46	GRF family protein