PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY43371.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 161aa MW: 18724.2 Da PI: 9.1492

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY43371.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	24.1	6.2e-08	110	143	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + GAY43371.1 110 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 143 469*****************************87 PP
2	ELK	26.6	1.3e-09	64	85	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ GAY43371.1 64 ELKIELKQGFKSRIEDVREEIL 85 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence
MRLCMFSGVS LGEGTGATMS DDEDDLHMDF SLDQSASDSH DLMGFGPLLP TETERSLMER 60 VRQELKIELK QGFKSRIEDV REEILRKRRA GKLPGDTTSV LKTWWQQHSK WPYPTEDDKA 120 KLVEETGLQL KQINNWFINQ RKRNWHSNSQ SVTSLKSKRK R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	141	161	RKRNWHSNSQSVTSLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	4e-97	TALE family protein