PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY43390.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 247aa    MW: 28379 Da    PI: 6.7881
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY43390.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.11e-1073120655
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                   +Er RR+++ + +  Lr+llP       ++K s ++   +Av+YIk+Lq
  GAY43390.1  73 RDIERHRRQEMSTLYRSLRSLLPLeY---LKGKRSMSDHMNEAVNYIKNLQ 120
                 679*********************77...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MDYIPSLVFP FDRTDPHDDQ LPCQQQYHTA GQQNDNQLIF NPLEYGSDLK RPETTNIFAV  60
NDDNSKKMKI MRRDIERHRR QEMSTLYRSL RSLLPLEYLK GKRSMSDHMN EAVNYIKNLQ  120
NRIQKLSEKR DELRRLSNSS SSPYYSTTSE SECSQTHINI LEDSVTVKPC LAGVEVAINT  180
SFRKGIPLSQ VVALLTEEGL TVVNCISTKI NERLLHNIES EVNDGGRNID PFELQQKIMK  240
LTSPSSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.14e-40bHLH family protein