PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY43405.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

GRF

Protein Properties

Length: 232aa MW: 25338.8 Da PI: 10.253

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY43405.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.3	3.7e-25	126	170	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr rsrk +e+ GAY43405.1 126 DPEPGRCRRTDGKKWRCSKEAIPDHKYCERHVHRGRLRSRKLVEA 170 79****************************************997 PP
2	QLQ	40.6	7.8e-15	57	91	3	37
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT Qlq+L Q l++Ky+ a++PvP++L+ +i+k GAY43405.1 57 FTIFQLQELQLQSLIFKYMEARLPVPSQLVIPIWK 91 7778*****************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence
MKPQNPPTKL ARLADFGTGR ANWSRSCSME SSKGDGSPSI ALELELGTGC SKRSCGFTIF 60 QLQELQLQSL IFKYMEARLP VPSQLVIPIW KSVASSVSGL SGDLHQLYPS FYGSGSLHLE 120 LKNGMDPEPG RCRRTDGKKW RCSKEAIPDH KYCERHVHRG RLRSRKLVEA SRRSPSTSSA 180 ITNANTNLSI SLPAVNNSST AIATASNPSP NFGFSPRSVL YDGGNKKLEP SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	2e-38	GRF family protein