PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY43575.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 248aa    MW: 27561.5 Da    PI: 6.177
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY43575.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-1874124256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g+
  GAY43575.1  74 TYRGVRMRQ-WGKWVSEIREPRK---KSRIWLGTFATPEMAARAHDVAALAIKGH 124
                 69****998.**********843...6***********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MEVSLNTENE AQATTSSSHP CSARESTSSS SSSPTKTVKS FKRIIIQEEK TKTASDNDHH  60
ESKTRKVSDL KHPTYRGVRM RQWGKWVSEI REPRKKSRIW LGTFATPEMA ARAHDVAALA  120
IKGHSAYLNF PELAHELPRP ATSSPKDIQA AAAKAAAIVS LPKGQELTNP PSPASTVTSH  180
DTQESASSPL LNNDDDDAFF DLPDLLLDGR HQMDELWDSF SWQQLTEPVS EPVGFGFWYD  240
QEPCHYNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35700.18e-49ERF family protein