PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY43690.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 238aa MW: 26927.7 Da PI: 7.5037

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY43690.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.1	1e-10	66	112	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+E+rRR+riNs +++Lr++l + Kl+Ka+ L ++v+ +++L GAY43690.1 66 KNHKEAEKRRRERINSHLNKLRSILSCN-----SKLDKASLLARVVQRVREL 112 58*********************997.....7*********9998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MQPENSELYR FLAQNGVGYY GFPGSACEFS SMMQQSFCSS SSYSFPLEVS GLTETTPEDR 60 ALAALKNHKE AEKRRRERIN SHLNKLRSIL SCNSKLDKAS LLARVVQRVR ELKEQTIELT 120 EVESFPSETD EITVLASSDY SSDGTLIFKA SLCCEDRSDL LPDIIEILKS LHLKTLKAEM 180 VTLGGRIRNV LIIAAEKDHS IESVHFLQNA LKSLLERSNS SDRSKRRRVL DHKIMIQQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	225	229	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41130.1	2e-88	bHLH family protein