PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY43708.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GeBP
Protein Properties Length: 241aa    MW: 28288.2 Da    PI: 9.1929
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY43708.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57381.11.6e-2547141297
      DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                 +f+r+w+e Dei +LqGl+d  a+ g     d+  fye +++ +s  +sk ql+eK+rrL+kKf+  ++++++g ++s  + hd++ fels+k+W 
  GAY43708.1  47 KFHRIWTEPDEIRFLQGLLDS-ASLGLTFPRDLPIFYERFSNAMSQPYSKYQLSEKLRRLRKKFRVTSSRISRGLNVSHLNFHDRNLFELSMKLWS 141
                 699*****************8.889999999****************************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MDSLKPSSAS KSKLPIKRKS EQSHNQDQSI TTVDFTDPTN INPPPFKFHR IWTEPDEIRF  60
LQGLLDSASL GLTFPRDLPI FYERFSNAMS QPYSKYQLSE KLRRLRKKFR VTSSRISRGL  120
NVSHLNFHDR NLFELSMKLW SPECLPTSPF GKISVCGGNV DVDFSSCGKK EKETIEEVAV  180
ARSVLDVFDE CLKEVRMIVA NQPKEEREKD FDRRWREQRF AEFDVLTRRL RLVLDDYFNW  240
Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.22e-17GeBP family protein