PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY43760.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GRAS
Protein Properties Length: 576aa    MW: 63477.3 Da    PI: 4.8416
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY43760.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS456.71.4e-1392065681374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 lv++L++cAea+++++l+ a+al++++  la+ ++ +m+++a+yf+eALa+r++r    +y    p++  +++  + l+    f+e++P+lkf+h+taN
  GAY43760.1 206 LVHTLMACAEAIQQENLKVADALVKHIGLLAAAQAGAMRKVATYFAEALARRIYR----IY----PQDCLDSSYNDILQ--MHFYETCPYLKFAHFTAN 294
                 689****************************************************....44....34433223444433..36**************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaIlea+++++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+++++++l+++g++La++A+++gv+fef+ +v+++l+dle+++L+++p
  GAY43760.1 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLEPDMLDIRP 393
                 *************************************************************************************************** PP

        GRAS 199 ..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                    E++aVn+v++lhrll++++ +e+    v++ +k ++Pk++++veqea+hns+ Fl+rf+eal+yys+lfdsle +  +  ++++++++++lgr+i+
  GAY43760.1 394 peVETVAVNSVFELHRLLARPGGIEK----VVSSIKAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVMSEVYLGRQIC 488
                 9999*********************9....*********************************************777556668889999999****** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 n+vac g++r+erhetl +Wr rl++aGF+pv+l+++a+kqa++ll+ ++ +dgyrvee++g+l+lgW++rpL+++SaW+
  GAY43760.1 489 NIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAgGDGYRVEENNGCLMLGWHTRPLIATSAWQ 568
                 *******************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 576 aa     Download sequence    
MKRDHQHSYG GGSGSGKGDY SSSTGNANKA KMWEEEQDTG GMDELLEVLG YKVRSSEMAD  60
VAQKLEQLEM VMGTAQEDGI SHLATDTVHY NPSDVSGWVQ SMLEGLNNTG FDSQARPIQD  120
PAESSTVNSI LGQQTSNQSR IFNDDSEYDL RAIPGSAAYP QPDSETENNR NKRMRVEINT  180
ANTNTIIPTE LARPVVVDSQ ETGVQLVHTL MACAEAIQQE NLKVADALVK HIGLLAAAQA  240
GAMRKVATYF AEALARRIYR IYPQDCLDSS YNDILQMHFY ETCPYLKFAH FTANQAILEA  300
FNNANRVHVI DFSLKQGMQW PALMQALALR PGGPPAFRLT GIGPPQPDNT DALQQVGWKL  360
AQLADTIGVE FEFRGFVCNS LADLEPDMLD IRPPEVETVA VNSVFELHRL LARPGGIEKV  420
VSSIKAMRPK IITIVEQEAN HNSPVFLDRF TEALHYYSSL FDSLEGSGLT PPSQDQVMSE  480
VYLGRQICNI VACDGTDRNE RHETLTQWRT RLGSAGFEPV HLGSNAYKQA SMLLALFAGG  540
DGYRVEENNG CLMLGWHTRP LIATSAWQLA KSTLVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.10.0GRAS family protein