PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY43944.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TCP

Protein Properties

Length: 241aa MW: 27812.3 Da PI: 10.0346

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY43944.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.9	3.7e-38	30	133	2	135
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaakskks 100 ++k+drhski+T++g RdRRvRls+e+a++fFdLqd+LGfdk+s+t+eWL++++ +aikel +++ + + GAY43944.1 30 PVKRDRHSKICTAQGFRDRRVRLSIEIARKFFDLQDMLGFDKASQTLEWLFNKSRKAIKELIELKRPCN------------------------------ 98 579***********************************************************55555.............................. PP TCP 101 qksaasalnlakesrakarararertrekmriknk 135 +s++ + +lak+sr +ararar+rtrekm++k GAY43944.1 99 GTSKQLMEKLAKKSRDQARARARQRTREKMFKKFA 133 455667799*******************99865 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MAFTGNASAV VNREHFDHPS SFIRNEKPVP VKRDRHSKIC TAQGFRDRRV RLSIEIARKF 60 FDLQDMLGFD KASQTLEWLF NKSRKAIKEL IELKRPCNGT SKQLMEKLAK KSRDQARARA 120 RQRTREKMFK KFADTTPQIS TQIKACQESS SYVVSHDQVQ EPCSSTLACQ TQDNQAPTDR 180 NQNPSSNFAH DQQNLEISKD TISCNTSNYN FNLPQNWDIV SAMPHQYTVC RAITKHESLN 240 W

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67260.2	4e-33	TCP family protein