PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY43997.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

ARR-B

Protein Properties

Length: 584aa MW: 65447.8 Da PI: 6.0617

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY43997.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	76.6	3.1e-24	200	253	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl GAY43997.1 200 KARVVWSIDLHQKFVKAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 253 68*****************.9*****************************8 PP
2	Myb_DNA-binding	36.7	9.9e-12	202	252	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ +t++++ s++qky+ GAY43997.1 202 RVVWSIDLHQKFVKAVNQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 252 678***********************************************7 PP
3	Response_reg	77.2	5.9e-26	20	128	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+ + +++l+++l+k y ev+++ +++al ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ Ga GAY43997.1 20 VLVVDDDLAWLKILEKMLKKCSY-EVTTCGLARDALSLLRERKdgYDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGAC 114 89*******************.***********999999******************6644.8******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ ++el++ GAY43997.1 115 DYLLKPIRMKELRN 128 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 584 aa Download sequence
MENGFSSPRN DTFNPAGLRV LVVDDDLAWL KILEKMLKKC SYEVTTCGLA RDALSLLRER 60 KDGYDIVISD VNMPDMDGFK LLEHVGLEMD LPVIMMSVDG ETSRVMKGVQ HGACDYLLKP 120 IRMKELRNIW QHVFRKRIHE VRDIENIEGF ESIHMTRSGS DQSVDGPLLT GEDLTSVRKR 180 KDAENRHDDR DCGDASSTKK ARVVWSIDLH QKFVKAVNQI GFDKVGPKKI LDLMNVPWLT 240 RENVASHLQK YRLYLTRLQK DELKTSVGGI KQKDSPSKDS AASFGIQNSI TVHHHNDVSN 300 GGYRFSGSNS VVQNVDAKSL EGDVKGIDTI PVTGHKRVLT VDIPNSHKAR CSQIGFSGSF 360 VPGHSDVNFT SFDSAIPTQP WSEVSETQFQ HEHKPLRLEN DFTQLPLPGP RHHIQVDCIQ 420 SGPSASSKPS VVDKDNLKPF DCTYKSNYPN AIPIGSAVDT FPVQTTSPIV NHQPFEPIAR 480 TTSSMKSQGL NLSCIPDLEA AQRNINWGVG SSLTSLDEDL QLCWLQGDCF AMNLGLQDIN 540 FSEYNDPALN SEVPFHLYDT MRFDYEHYYD PTECPIIDQG LFIA

Sequence ? help Back to Top

Protein Sequence Length: 584 aa Download sequence

MENGFSSPRN DTFNPAGLRV LVVDDDLAWL KILEKMLKKC SYEVTTCGLA RDALSLLRER  60
KDGYDIVISD VNMPDMDGFK LLEHVGLEMD LPVIMMSVDG ETSRVMKGVQ HGACDYLLKP  120
IRMKELRNIW QHVFRKRIHE VRDIENIEGF ESIHMTRSGS DQSVDGPLLT GEDLTSVRKR  180
KDAENRHDDR DCGDASSTKK ARVVWSIDLH QKFVKAVNQI GFDKVGPKKI LDLMNVPWLT  240
RENVASHLQK YRLYLTRLQK DELKTSVGGI KQKDSPSKDS AASFGIQNSI TVHHHNDVSN  300
GGYRFSGSNS VVQNVDAKSL EGDVKGIDTI PVTGHKRVLT VDIPNSHKAR CSQIGFSGSF  360
VPGHSDVNFT SFDSAIPTQP WSEVSETQFQ HEHKPLRLEN DFTQLPLPGP RHHIQVDCIQ  420
SGPSASSKPS VVDKDNLKPF DCTYKSNYPN AIPIGSAVDT FPVQTTSPIV NHQPFEPIAR  480
TTSSMKSQGL NLSCIPDLEA AQRNINWGVG SSLTSLDEDL QLCWLQGDCF AMNLGLQDIN  540
FSEYNDPALN SEVPFHLYDT MRFDYEHYYD PTECPIIDQG LFIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-150	ARR-B family protein