PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY44101.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NF-YC
Protein Properties Length: 143aa    MW: 16319.7 Da    PI: 9.0857
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY44101.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC58.11.9e-186941097
       NF-YC 10 iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97
                 e++t+  + e+P+ r+kki+k ded++++++ea  ++s++ elf+  l+ +s   a e+kr+t+k  d+  av+r   + dfl+d  p
  GAY44101.1  6 EEQNTETTRPEFPVGRVKKIIKLDEDINKVTSEALFIVSRSTELFLRFLAEKSAEAAIEKKRKTIKLGDMRVAVKRHRpTSDFLLDSLP 94
                689999999*****************************************************************9975389*****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MAEEAEEQNT ETTRPEFPVG RVKKIIKLDE DINKVTSEAL FIVSRSTELF LRFLAEKSAE  60
AAIEKKRKTI KLGDMRVAVK RHRPTSDFLL DSLPLPIQSL DRPATGKARS RPAVEKPLPV  120
GTRRIDRFFH KPENEVPVEI EDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.11e-38NF-YC family protein