PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY44164.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 226aa    MW: 25732.3 Da    PI: 10.208
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY44164.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM112.35.3e-35421611128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 lp G+rF+P+ +el+++yL kk++g++l++ ++i+e+d+y ++P++Lp +++k ++  e yfF++  k        +r t+sgyWk tg+d ++ls ++
  GAY44164.1  42 LPLGYRFSPRGNELITHYLIKKISGQQLPA-NIIREIDLYAFDPHQLPiSEFKYGKPdEAYFFTRPGK--------RRRTSSGYWKPTGRDLPILS-GK 130
                 699***************************.89***************756555444499***99865........566899**************.99 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 + vg k++L+fy+g+ap+g kt Wv+he+r+
  GAY44164.1 131 AIVGFKRILIFYEGKAPRGIKTPWVVHEFRV 161
                 9****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MALLDIVSYS QQTSGATSNN NLLAYSISGG RGSNQDDEEY NLPLGYRFSP RGNELITHYL  60
IKKISGQQLP ANIIREIDLY AFDPHQLPIS EFKYGKPDEA YFFTRPGKRR RTSSGYWKPT  120
GRDLPILSGK AIVGFKRILI FYEGKAPRGI KTPWVVHEFR VNPLYFSAIR RNKLDEDVNA  180
KVTRVESYIV CKIRYKRQRQ SDKCGTSSKT QKANQSAAES PLKETV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.12e-34NAC family protein