PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY44165.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 202aa MW: 23267.6 Da PI: 9.4141

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY44165.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	92.5	6.8e-29	44	173	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kg 97 +p+G+rF P+d+++++ yL k+ g+k++ ik++d+ +++P+d + + +e+yf++ +k +g ++ +tk+gyW+a g d +v+s + GAY44165.1 44 VPVGIRFFPRDHQVIQPYLLSKILGTKHTPLYPIKDMDLSTFDPNDVVFDERCRANETYFYAWLVNKRGKGMVQRVVTKRGYWEADGVDVPVYSDreMK 142 599*********************9888788**********865556789*********9999999**************84444 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 vg kk +fy g++p+g+k+ W m eyr+ GAY44165.1 143 VMVGFKKNWTFYLGTEPEGQKSAWSMTEYRV 173 559************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MSSSLPPASS SSNKILELEE QRSSALKSFN SKNRGRIDFE DGYVPVGIRF FPRDHQVIQP 60 YLLSKILGTK HTPLYPIKDM DLSTFDPNDV VFDERCRANE TYFYAWLVNK RGKGMVQRVV 120 TKRGYWEADG VDVPVYSDRE MKVMVGFKKN WTFYLGTEPE GQKSAWSMTE YRVNPRLIPA 180 DQMNDDVKTR IVSYAVCKIT KA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12977.1	1e-21	NAC family protein