PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY44171.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 199aa    MW: 22868.2 Da    PI: 9.9117
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY44171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM121.29.3e-38181451128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 lp G+rF+P+ +e++v+yL+kk+ +++l+  ++ik++d+y + +P +Lp  ++k+ + +e yfF++ +++  +  +++r+tksgyWk tgk ++++  +
  GAY44171.1  18 LPLGYRFSPNGQEIIVQYLTKKILNQRLPS-NIIKDIDLYAYdHPCQLPiGEFKNcKPDEGYFFTQLENRDGK-GQPKRTTKSGYWKDTGKVEQIIW-N 113
                 699**************************9.89******98879*****656665355588******999876.58999*****************9.8 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++ vg kk+Lvfy+g+ p+g++++Wvmhe+r+
  GAY44171.1 114 NSIVGFKKILVFYEGKPPTGTRSRWVMHEFRV 145
                 999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MASQGVFGSI NQEEEFDLPL GYRFSPNGQE IIVQYLTKKI LNQRLPSNII KDIDLYAYDH  60
PCQLPIGEFK NCKPDEGYFF TQLENRDGKG QPKRTTKSGY WKDTGKVEQI IWNNSIVGFK  120
KILVFYEGKP PTGTRSRWVM HEFRVNPSYL SAFALDITTQ TEVVNYVACK IHHKKESGNK  180
RSEAGKKKNL PVRKKTKAC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07680.13e-33NAC family protein