PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY44239.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

YABBY

Protein Properties

Length: 174aa MW: 19329.9 Da PI: 9.3991

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY44239.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	149.5	3.2e-46	14	155	5	163
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklse 103 +se++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l ++ + q+ +++ l+++e++ n+ k +as+s ss + GAY44239.1 14 PQSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRP-PQQGPSQM------------SLRFQEKQSFCNDFKLGNASSSSSS----T 95 679**********************************985533332.23334433............4555555555566666665555554....4 PP YABBY 104 nedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 +++ +p++p v++PPek+ r Psaynrf+keeiqrika+nP+i hreafs+aaknWa + GAY44239.1 96 SSEPLSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSTAAKNWARY 155 55667899999*********************************************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
MNLEDNISTD LQVPQSEHLC YVRCNFCNTV LAVGIPCKRL LDTVTVKCGH CSNLSFLSTR 60 PPQQGPSQMS LRFQEKQSFC NDFKLGNASS SSSSTSSEPL SPKAPFVVKP PEKKHRLPSA 120 YNRFMKEEIQ RIKAANPEIP HREAFSTAAK NWARYIPNSL AGSTSGSSSH VRDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	6e-65	YABBY family protein