PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY44257.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 148aa    MW: 17057.6 Da    PI: 7.5013
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY44257.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.95.7e-061031351754
                 HHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  17 NsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 N++f  Lr+++P  +       ++Ka+iL  +++Y+k L
  GAY44257.1 103 NEKFMLLRSVVPYiS------EVDKASILNDTIKYLKRL 135
                 99***********66......8***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MSHIQLKELQ EGNHMKLSSL DLGIDDDAYY KKTLFAIFGR SNQLNDNLSF LSVEHKSSFE  60
IPLMYGGCAH RSPKEICRKY CPLTMESENF CEEHVSLDKR TKNEKFMLLR SVVPYISEVD  120
KASILNDTIK YLKRLKARVE EGFSANSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00480.14e-16bHLH family protein