PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY44335.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family WRKY
Protein Properties Length: 253aa    MW: 28275 Da    PI: 8.898
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY44335.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.11.8e-2893153159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dg++WrKYGqK+ k+++ pr+Y+rC++a  gCpvkkkv+r+ ed+++++ tYegeHnh+
  GAY44335.1  93 VKDGHQWRKYGQKVTKDNPSPRAYFRCSMAssGCPVKKKVQRCMEDKSFLVATYEGEHNHD 153
                 58**************************9999****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MMILQMKLLQ AKLEHVRKQN ENLRHLVKAM NNQCNDLLAR IHEANRTYSS SDHHHFNNNI  60
NIGGVTAQVP PVPNAKQSRI FVKADSKDSS LIVKDGHQWR KYGQKVTKDN PSPRAYFRCS  120
MASSGCPVKK KVQRCMEDKS FLVATYEGEH NHDVQCSSLG QSSSLTNYCS PKSSIVHCPD  180
YQTTDSFGSD VTLDLTLSGS NQETRPPRNL MQVCDDKKKI EEYVASLTKD PSFTIAVADA  240
VASSINGPPH RPM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.13e-39WRKY family protein