PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY44889.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 378aa    MW: 42528.1 Da    PI: 8.1405
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY44889.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.45.8e-07130170445
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      WT+eE ++l ++++++  + +  Ia +++  Rt +++k+r++
       GAY44889.1 130 WTKEETDQLFELCERFDLR-FIVIADRFPSSRTVEELKDRYY 170
                      *******************.*********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MDAKDILGIP KTQLPTTQEK KSRPQKEPQR KPDGISREVY ALTGGLAPLM PSIDVSQLKK  60
RPPSDEKITW QWLPFTNSAR KDNLQLYHWV RVVNGVPPTG DYSFAKYNKS VDVVKYTDEE  120
YEKYLTDPMW TKEETDQLFE LCERFDLRFI VIADRFPSSR TVEELKDRYY GVSRAILIAR  180
APSPTDVSGH PLVKDPYNVS QEVERKRALS MVLSQTKHQE RKDAEVLAEA KRITDSRMAS  240
RAAEEPEMPV ASHVGSESAD RAVVLGDTVS PSSNIQLPSA TVVPSTSIIA DSASTLASLR  300
MLRVYLRTYA LEQMVQAASS SAGLRTIKRV EQALQELGLQ YKEAEGSSYR DGSYIDMPGT  360
PKRSQRAGDQ DRTFCYVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47210.10.0MYB_related family protein