PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY44892.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB
Protein Properties Length: 289aa    MW: 33048.3 Da    PI: 6.3984
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY44892.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.24.3e-192673148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT eEd ll ++v+ +G g+W+++a+  g++Rt+k+c++rw++yl
       GAY44892.1 26 KGPWTVEEDSLLMNYVAIHGEGRWNAVASSAGLNRTGKSCRLRWLNYL 73
                     79********************************************97 PP
2Myb_DNA-binding46.86.9e-1579122146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T +E++ +++++ ++G++ W++Ia++++ gRt++++k++w++
       GAY44892.1  79 RGNITLQEQLMILELHSRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 122
                      7899******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MDAHVGGFSS GNHRQQSEEA ILGVRKGPWT VEEDSLLMNY VAIHGEGRWN AVASSAGLNR  60
TGKSCRLRWL NYLRPDVRRG NITLQEQLMI LELHSRWGNR WSKIAQYLPG RTDNEIKNYW  120
RTRVQKHAKQ LKCDVNSKQF RDAMRFVWVP RLIERIQAQS DSNSSGQPTS STTTCTDNST  180
TTNHADLATS QVSDSRPDPS FRADISGAQV YPESDLNDSY NLHSDWNYSQ NGLDNACESW  240
GWSKPGSDTQ GFEQQIQNNN WLGCGDSLES LWNEENIWFL RQQLYDDKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G48000.18e-81MYB family protein