PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY44925.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

SBP

Protein Properties

Length: 1071aa MW: 119047 Da PI: 6.506

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY44925.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.2	1.7e-41	149	226	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C adls+ak+yhrrhkvCe+hska+ +lv +++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ GAY44925.1 149 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNP 226 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1071 aa Download sequence
METRFRGEAH HFYGMNSMDL RAVGKKTLEW DLNDWKWDGD LFIASKLNPA PNENIGRQFF 60 PLAVGNSSNS SSSCSDEVNL GIENGKREVE KKRRAVVVED HNSYEVAAGG LSLKLGGNGH 120 PLSEREMGNW AGSSGKKTKF GGGSSSRAVC QVEDCGADLS NAKDYHRRHK VCEMHSKASR 180 ALVGNVMQRF CQQCSRFHVL QEFDEGKRSC RRRLAGHNKR RRKTNPDAVA NGSSPNNDQT 240 SGYLLISLLR ILSNMHCKLC QYDQIDHGLA YYCAIPILQV PISMKDSLLI VFLFITTSRS 300 DQRTDQDLLS HLLRGLASPA GENGGRGISG LLQEHQDMLN ERTSAGNSEV VQAFLANGQG 360 CPTPFRQQLN ATVSEMPQQV SLPHDARGAE DQDGNVAQIK MNNFDLNDVY IDSDDGTEDV 420 ERSPVPANLG TSSIDCPSWV RQDSQQSSPP QTSGNSDSAS AQSPSSSSDA QSRTDRIVFK 480 LFGKEPNDFP LVLRAQILDW LSHSPSDMES YIRPGCVILT IYLRQAEAAW EENGLFLRQY 540 SRPYNCNCCL PSAQLCCDLT FSLSRLLDLS NDSFWTSGWV YARVQHQIAF IYNGQVVLDT 600 SLPPRSNNYS KILSVKPIAV PASERAQFFV KGINLGRSAT RFALLSPAVL FVFMLLNTTG 660 LADTYFAEGK YMVQEATHEL LDDVDGFKEL DELQCVNFSC SIPAVTGRGF IEIEDHGFSS 720 TFFPFIVAEE DVCSEIRMLE SALEFNRTDA DVERFGKIDT KNQAMDFIHE IGWLFHRSQS 780 KSRLGHLDPN TDLFPLRRFK WLIEFSMDHE WGAVVKKLLH ILLDGTVSLG EHPSLDLALT 840 ELGLLHRAVR KNSRPLVDLL LRFVPLEVSD RLGSENKALV DGVHKGFLFR PDVIGPAGLT 900 PIHIAAGKDG SEDVLDALTD DPGMVGIEAW KNARDSSGST PEDYARLRGH YSYIHLVQKK 960 INKRPNGGHV VVDICGVVPD SNIYQKQNNE STASFEIGQT PVRPTQHNCK LCHQKLGYAT 1020 ASRSLVYKPA MLSMVAIAAV CVCVALLFKS CPEVLYVFRP FRWEMLDYGT S

Sequence ? help Back to Top

Protein Sequence Length: 1071 aa Download sequence

METRFRGEAH HFYGMNSMDL RAVGKKTLEW DLNDWKWDGD LFIASKLNPA PNENIGRQFF  60
PLAVGNSSNS SSSCSDEVNL GIENGKREVE KKRRAVVVED HNSYEVAAGG LSLKLGGNGH  120
PLSEREMGNW AGSSGKKTKF GGGSSSRAVC QVEDCGADLS NAKDYHRRHK VCEMHSKASR  180
ALVGNVMQRF CQQCSRFHVL QEFDEGKRSC RRRLAGHNKR RRKTNPDAVA NGSSPNNDQT  240
SGYLLISLLR ILSNMHCKLC QYDQIDHGLA YYCAIPILQV PISMKDSLLI VFLFITTSRS  300
DQRTDQDLLS HLLRGLASPA GENGGRGISG LLQEHQDMLN ERTSAGNSEV VQAFLANGQG  360
CPTPFRQQLN ATVSEMPQQV SLPHDARGAE DQDGNVAQIK MNNFDLNDVY IDSDDGTEDV  420
ERSPVPANLG TSSIDCPSWV RQDSQQSSPP QTSGNSDSAS AQSPSSSSDA QSRTDRIVFK  480
LFGKEPNDFP LVLRAQILDW LSHSPSDMES YIRPGCVILT IYLRQAEAAW EENGLFLRQY  540
SRPYNCNCCL PSAQLCCDLT FSLSRLLDLS NDSFWTSGWV YARVQHQIAF IYNGQVVLDT  600
SLPPRSNNYS KILSVKPIAV PASERAQFFV KGINLGRSAT RFALLSPAVL FVFMLLNTTG  660
LADTYFAEGK YMVQEATHEL LDDVDGFKEL DELQCVNFSC SIPAVTGRGF IEIEDHGFSS  720
TFFPFIVAEE DVCSEIRMLE SALEFNRTDA DVERFGKIDT KNQAMDFIHE IGWLFHRSQS  780
KSRLGHLDPN TDLFPLRRFK WLIEFSMDHE WGAVVKKLLH ILLDGTVSLG EHPSLDLALT  840
ELGLLHRAVR KNSRPLVDLL LRFVPLEVSD RLGSENKALV DGVHKGFLFR PDVIGPAGLT  900
PIHIAAGKDG SEDVLDALTD DPGMVGIEAW KNARDSSGST PEDYARLRGH YSYIHLVQKK  960
INKRPNGGHV VVDICGVVPD SNIYQKQNNE STASFEIGQT PVRPTQHNCK LCHQKLGYAT  1020
ASRSLVYKPA MLSMVAIAAV CVCVALLFKS CPEVLYVFRP FRWEMLDYGT S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein