PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY45016.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 143aa    MW: 16575.7 Da    PI: 8.6858
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY45016.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM128.36.1e-4011237128
         NAM   7 FhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglk 103
                 F+Pt++e+++++L++k++g+  ++ ++i++++i+ +ePw+Lp ++++ +++ewyfFs+ +kkya+++r  r+tk g Wk tg d+++ ++ ++e++g+k
  GAY45016.1   1 FRPTEDEIITYFLQNKIHGHASRV-RAINTLNICAFEPWELPeQAATPDDEEWYFFSELQKKYANSDRVDRTTKVGSWKVTGGDRQIWDNcGKEVIGVK 98 
                 9********************999.89***************445555889**************************************988889**** PP

         NAM 104 ktLvfykgrapkgektdWvmheyrl 128
                 k Lvf+kg+ +k++kt+Wv+hey+ 
  GAY45016.1  99 KNLVFHKGHGSKAKKTSWVIHEYHS 123
                 ***********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
FRPTEDEIIT YFLQNKIHGH ASRVRAINTL NICAFEPWEL PEQAATPDDE EWYFFSELQK  60
KYANSDRVDR TTKVGSWKVT GGDRQIWDNC GKEVIGVKKN LVFHKGHGSK AKKTSWVIHE  120
YHSSKASIHQ AISSVLYNLF FFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49530.12e-35NAC family protein