PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY45019.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Protein Properties

Length: 401aa MW: 45180.8 Da PI: 7.5234

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY45019.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	102.5	2.3e-32	132	236	1	99
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelv 93 f+kv tpsdv+k++rlv+pk++ae++ ++++e++ l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ g+ + +l+ GAY45019.1 132 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSSNEKGLLLNFEDRNGKAWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDTVSFQRGvGElGKDRLY 230 89**************************66677899***********************************************666999999999 PP EEEE-S CS B3 94 vkvfrk 99 + ++r+ GAY45019.1 231 IDWRRR 236 999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MMNFVQEEKG NSNNNNEEDQ DEDHQKERIK LPFSVSSSSS SVSSSKYKAF VPHHHQNSWL 60 LGPIDSQEAA TNFDNREDLM DLSLGNNNNN NEDQPHKHSG NINNANVANG TGSSTTGESS 120 GMYRSIEKEH MFDKVVTPSD VGKLNRLVIP KQHAEKYFPL DSSSNEKGLL LNFEDRNGKA 180 WRFRYSYWNS SQSYVMTKGW SRFVKDKKLD AGDTVSFQRG VGELGKDRLY IDWRRRPDVH 240 HVPDPTTLAQ MQFQNQLRFQ QSLRWGTRLY SLPQSLSNYG PFSYNTIHNP YYQHHQQQQI 300 LGFGGNASST MPVQYYLRPS SVSQQIEGGH MPMVIDSVPV VVPGKTASST AAKRLRLFGV 360 NMDCPTQDDQ SPATSSSSTR QAAASEYSSK GKSSLSFDLD L

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MMNFVQEEKG NSNNNNEEDQ DEDHQKERIK LPFSVSSSSS SVSSSKYKAF VPHHHQNSWL  60
LGPIDSQEAA TNFDNREDLM DLSLGNNNNN NEDQPHKHSG NINNANVANG TGSSTTGESS  120
GMYRSIEKEH MFDKVVTPSD VGKLNRLVIP KQHAEKYFPL DSSSNEKGLL LNFEDRNGKA  180
WRFRYSYWNS SQSYVMTKGW SRFVKDKKLD AGDTVSFQRG VGELGKDRLY IDWRRRPDVH  240
HVPDPTTLAQ MQFQNQLRFQ QSLRWGTRLY SLPQSLSNYG PFSYNTIHNP YYQHHQQQQI  300
LGFGGNASST MPVQYYLRPS SVSQQIEGGH MPMVIDSVPV VVPGKTASST AAKRLRLFGV  360
NMDCPTQDDQ SPATSSSSTR QAAASEYSSK GKSSLSFDLD L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46870.1	4e-75	B3 family protein