PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY45179.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

C2H2

Protein Properties

Length: 172aa MW: 18923.2 Da PI: 10.8992

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY45179.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.9	0.0014	44	66	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H GAY45179.1 44 FECKTCNRQFPSFQALGGHRASH 66 89**********99999998887 PP
2	zf-C2H2	13.4	0.00023	90	112	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg+ F L H+r+H GAY45179.1 90 HECSICGQEFAMGQALGGHMRRH 112 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MAVKGGLANG EIAERLALAN CLMLLTRSNR AKLPIKKRLA SDVFECKTCN RQFPSFQALG 60 GHRASHKKPR LINVETKTLS STTATKPKLH ECSICGQEFA MGQALGGHMR RHRIAMNESL 120 NSAVIVSQSP PVLRRSNSSR RVFGLDLNLT PLENDLEALF GKMVPKVDLL MT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	9e-50	C2H2 family protein