PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY45248.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 266aa    MW: 30141.1 Da    PI: 6.7816
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY45248.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.29.5e-061581971155
                 HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 rR +++ +++  L++l+ +      +K + a++L++A  YIk Lq
  GAY45248.1 158 RRSQKLSDKITALQKLVSPY-----GKTDTASVLQEASLYIKLLQ 197
                 7999**************99.....9****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MPYLANSMQV DSLVTNVHRN DFLMDSKLSK DDNQLRDGGF AISYQSLVNC QQGIQSITTS  60
CDNVSPQSFL LSRMRSLPQF DVDFESQQNE RTHAIEATDL LPQEGVCANL ALNKAALKVS  120
KKINNKKKTK LNSFCEEQWR HQVNDTTTRI QEHRVPVRRS QKLSDKITAL QKLVSPYGKT  180
DTASVLQEAS LYIKLLQEQI QMLSGSYNSL QVQVQVLHSL EMGEEQLDLR SRGLCLVPIS  240
FSQKVTQEDL LESHSTSRNT MVDTEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31730.11e-22bHLH family protein