PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY45266.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

C2H2

Protein Properties

Length: 168aa MW: 18340.6 Da PI: 8.1555

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY45266.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11	0.0014	45	67	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H GAY45266.1 45 FECKTCNRQFPSFQALGGHRASH 67 89**********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 168 aa Download sequence
MKRTFQEPTE LNHSLNMANC LMFMPHGGDF DAVNGVNMAV ADRAFECKTC NRQFPSFQAL 60 GGHRASHKKS RVTEGSGGGA DTQQSPVKPK THECSVCGLE FAIGQALGGH MRRHRAGASH 120 ANEKLSAFSS LSDTAPLVEK ANSRRVLCLD LNLTPYENDL EFYRLGSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	4e-40	C2H2 family protein