PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY45406.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NF-YB

Protein Properties

Length: 171aa MW: 19239.2 Da PI: 5.0436

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY45406.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	85.5	6.1e-27	32	80	1	49
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtse 49 vreqdr+lPian+srimkk+lPan+ki+kdak+tvqecvsefisf+tse GAY45406.1 32 VREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSE 80 69*********************************************99 PP
2	NF-YB	83.4	2.9e-26	111	160	44	93
NF-YB 44 sfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 sf+++ asdkcq+ekrktingddllwa+atlGfedy++plk+yl++yre+ GAY45406.1 111 SFLSCRASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREV 160 9***********************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
GFYWSEMAEA PTSPAGGSHE SGGEQSPHAG GVREQDRYLP IANISRIMKK ALPANGKIAK 60 DAKDTVQECV SEFISFITSE YELAFVLWNV VCLFAVVLLE DLIRFLEIGF SFLSCRASDK 120 CQKEKRKTIN GDDLLWAMAT LGFEDYIDPL KAYLMRYREV RFLSLLAPPF L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37060.1	4e-61	NF-YB family protein