PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY45466.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

YABBY

Protein Properties

Length: 223aa MW: 24839.9 Da PI: 6.8284

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY45466.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	207.1	6.6e-64	8	163	5	170
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklse 103 ++eq+Cy+ CnfCn +lavsvP +sl+ +vtvrCGhC++l svn+a a q l+ ++ + ++ ++ +++ ++++ ++++s+++ ++ GAY45466.1 8 VAPEQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLSWQDV-H------HHQAPSYASPECRIDLGSSSKCNNKISAMRTPT 99 689**********************************************9999995.2......233333333344444444444444444433344 PP YABBY 104 nedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 n+ e v+rPPekrqrvPsayn+fikeeiqrika+nPdishreafs+aaknWahfP+ihfgl GAY45466.1 100 NKATEE---RVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGL 163 444433...3589**************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MSSCGIDVAP EQLCYIPCNF CNIVLAVSVP CSSLLDIVTV RCGHCSNLWS VNMAAAFQSL 60 SWQDVHHHQA PSYASPECRI DLGSSSKCNN KISAMRTPTN KATEERVVNR PPEKRQRVPS 120 AYNQFIKEEI QRIKANNPDI SHREAFSTAA KNWAHFPHIH FGLMLEANNQ PKLDDLLSNL 180 NYKIDDISPS SDWLLGTASC QGQRFEINDS AETSGPHHQV FSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26580.1	2e-87	YABBY family protein